Introduction
Pumpkin Cream Cheese Muffins are the ultimate fall treat, soft and spiced with a smooth cream cheese swirl in every bite. As the leaves change and the air turns crisp, these muffins bring warmth and comfort to your kitchen. The delightful combination of pumpkin puree, aromatic spices, and creamy filling creates a delicious experience that is ideal for breakfast or a cozy afternoon snack. Let’s dive into this scrumptious recipe that captures the essence of fall!
Why You’ll Love This Pumpkin Cream Cheese Muffin Recipe
There are countless reasons to fall in love with these soft pumpkin cream cheese muffins. First and foremost, they are incredibly moist, thanks to the cream cheese filling and pumpkin puree. Additionally, the aroma of pumpkin spice muffins baking in your oven will fill your home with a warm, inviting scent. You’ll appreciate how easy it is to whip up this best pumpkin cream cheese muffin recipe in just under an hour. They’re perfect for fall gatherings or simply to enjoy on a chilly morning. Plus, you can customize them with mix-ins like chocolate chips or nuts to suit your taste. Finally, these muffins can easily be made gluten-free or even healthy, catering to various dietary preferences.
Ingredients for Pumpkin Cream Cheese Muffins
Gather these items:
- 2 cups all-purpose flour
- 1 cup brown sugar
- 1 ½ teaspoons baking powder
- 1 teaspoon baking soda
- 1½ teaspoons pumpkin spice
- ½ teaspoon salt
- 1 cup pumpkin puree (not pumpkin pie mix)
- ½ cup whole milk
- ½ cup vegetable oil
- 1 large egg
- 1 teaspoon vanilla extract
- 1 tablespoon pumpkin seeds (for decorating, optional)
- 4 ounces cream cheese (room temperature, use block, not whipped)
- 2 tablespoons granulated sugar
- 1 teaspoon all-purpose flour
- ½ teaspoon vanilla extract
- 1 teaspoon whole milk
How to Make Pumpkin Cream Cheese Muffins Step-by-Step
- Step 1: Preheat the oven to 350°F.
- Step 2: Line a 12-cup muffin tin with paper muffin liners and set aside.
- Step 3: Add the all-purpose flour, brown sugar, baking powder, baking soda, pumpkin spice, and salt to a large mixing bowl. Whisk until well combined and set aside.
- Step 4: Add the pumpkin puree, milk, vegetable oil, egg, and vanilla extract to another large mixing bowl. Whisk until well combined.
- Step 5: Pour the wet ingredients into the bowl with the dry ingredients. Mix until just combined. It’s important not to overmix the batter, as this can result in dense muffins. Mix the wet and dry ingredients together only until no white flour streaks remain.
- Step 6: Divide the batter between the paper muffin liners and set aside.
- Step 7: Add the softened cream cheese, granulated sugar, and flour to a small mixing bowl. Mix until well combined.
- Step 8: Add the vanilla extract and milk and mix until smooth.
- Step 9: Transfer the cream cheese filling to a piping bag or zip-loc bag.
- Step 10: Pipe the filling into the center of each muffin just below the surface, ensuring it’s still visible.
- Step 11: Sprinkle with pumpkin seeds, if using.
- Step 12: Place the muffin tin on the center rack of the preheated oven, and bake for 20 minutes, or until set.
- Step 13: Let the muffins cool in the tin for five minutes and then transfer to a wire cooling rack to cool completely.

Pro Tips for the Best Pumpkin Cream Cheese Muffins
Keep these in mind:
- Store muffins in an airtight container for up to 3 days.
- These muffins freeze well for up to 3 months.
- For a twist, try adding chocolate chips for a different flavor.
- Ensure your ingredients are at room temperature for the best results.
Best Ways to Serve Pumpkin Cream Cheese Muffins
These muffins are perfect on their own but can be enhanced with a few serving ideas:
- Top with a light dusting of powdered sugar or pumpkin muffins with cream cheese icing.
- Pair with your favorite hot beverage, such as pumpkin spice latte or apple cider.
- Serve warm with a side of whipped cream for a delightful treat.

How to Store and Reheat Pumpkin Cream Cheese Muffins
To keep your muffins fresh, store them in an airtight container at room temperature for up to 3 days. You can also freeze them for up to 3 months. When you’re ready to enjoy them again, simply reheat in the microwave for a few seconds or place them in a preheated oven at 350°F for a few minutes until warmed through.
Frequently Asked Questions About Pumpkin Cream Cheese Muffins
What’s the secret to perfect Pumpkin Cream Cheese Muffins?
The secret lies in not overmixing the batter. Gently fold the wet and dry ingredients together until just combined for the fluffiest muffins. Adding a swirl of cream cheese in the center also elevates their texture and flavor.
Can I make Pumpkin Cream Cheese Muffins ahead of time?
Absolutely! You can prepare the batter the night before and store it in the refrigerator. In the morning, simply fill the muffin liners and bake freshly in the oven for a warm breakfast treat.
How do I avoid common mistakes with Pumpkin Cream Cheese Muffins?
To avoid common mistakes, make sure your cream cheese is at room temperature to ensure a smooth filling. Also, check your baking powder and soda for freshness to achieve the perfect rise.
Variations of Pumpkin Cream Cheese Muffins You Can Try
Feel free to explore these delicious variations:
- Add a streusel topping for a crunchy texture.
- Make them gluten-free pumpkin cream cheese muffins by swapping the flour for a gluten-free blend.
- Incorporate nuts or dried fruits for added flavor and nutrition.
- Drizzle with caramel sauce for an indulgent treat.
For more tips on baking, check out this guide on baking essentials!
Print
Delicious Pumpkin Cream Cheese Muffins for Fall Baking
- Total Time: 55 minutes
- Yield: 12 muffins 1x
- Diet: Vegetarian
Description
Our Pumpkin Cream Cheese Muffins are the ultimate fall treat, soft and spiced with a smooth cream cheese swirl in every bite.
Ingredients
- 2 cups all-purpose flour
- 1 cup brown sugar
- 1 ½ teaspoons baking powder
- 1 teaspoon baking soda
- 1½ teaspoons pumpkin spice
- ½ teaspoon salt
- 1 cup pumpkin puree (not pumpkin pie mix)
- ½ cup whole milk
- ½ cup vegetable oil
- 1 large egg
- 1 teaspoon vanilla extract
- 1 tablespoon pumpkin seeds (for decorating, optional)
- 4 ounces cream cheese (room temperature, use block, not whipped)
- 2 tablespoons granulated sugar
- 1 teaspoon all purpose flour
- ½ teaspoon vanilla extract
- 1 teaspoon whole milk
Instructions
- Preheat the oven to 350°F.
- Line a 12-cup muffin tin with paper muffin liners and set aside.
- Add the all-purpose flour, brown sugar, baking powder, baking soda, pumpkin spice, and salt to a large mixing bowl. Whisk until well combined and set aside.
- Add the pumpkin puree, milk, vegetable oil, egg, and vanilla extract to another large mixing bowl. Whisk until well combined.
- Pour the wet ingredients into the bowl with the dry ingredients. Mix until just combined. It’s important not to overmix the batter, as this can result in dense, dry muffins. Mix the wet and dry ingredients together only until no white flour streaks remain.
- Divide the batter between the paper muffin liners and set aside.
- Add the softened cream cheese, granulated sugar, and flour to a small mixing bowl. Mix with a wooden spoon until well combined. You can also use a handheld mixer or stand mixer.
- Add the vanilla extract and milk and mix until smooth and well combined.
- Transfer the cream cheese filling to a piping bag or zip-loc bag.
- Pipe the filling into the center of each muffin just below the surface, so that the cream cheese is still visible. The cream cheese filling may sink slightly into the muffin batter.
- Sprinkle with pumpkin seeds, if using.
- Place the muffin tin on the center rack of the preheated oven, and bake for 20 minutes, or until set. The muffins are cooked through if they spring back when lightly touched in the center. Alternatively, a skewer or toothpick can be inserted alongside the cream cheese filling. If the skewer or toothpick comes out clean or with only a few moist crumbs attached, the muffins are cooked through.
- Let the muffins cool in the tin for five minutes and then transfer to a wire cooling rack to cool completely.
Notes
- Store muffins in an airtight container for up to 3 days.
- These muffins freeze well for up to 3 months.
- Try adding chocolate chips for a different flavor.
- Prep Time: 15 minutes
- Cook Time: 20 minutes
- Category: Baked Goods
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 294
- Sugar: 14 g
- Sodium: 200 mg
- Fat: 14 g
- Saturated Fat: 3 g
- Unsaturated Fat: 8 g
- Trans Fat: 0 g
- Carbohydrates: 39 g
- Fiber: 1 g
- Protein: 4 g
- Cholesterol: 30 mg
Keywords: Pumpkin Cream Cheese Muffins, Fall Treat, Baking, Muffins